src.model_balancing.io
======================

.. py:module:: src.model_balancing.io

.. autoapi-nested-parse::

   A module for I/O operations related to model balancing.





Module Contents
---------------

.. py:function:: standardize_input_matrix(x: Union[List[float], numpy.array], unit: str) -> src.model_balancing.Q_

   Create a 2D Numpy array of Quantities.

   If the input is only 1D, make sure it becomes a 2D array with a single
   column. This is important because we always assume that all our inputs are
   2D.


.. py:function:: to_state_sbtab(v, c, e, delta_g, metabolite_names, reaction_names, state_names) -> sbtab.SBtab.SBtabDocument

   Create a state SBtab.

   The state SBtab contains the values of the state-dependent variables,
   i.e. flux, concentrations of metabolites, concentrations of enzymes,
   and the ΔG' values.


.. py:function:: to_model_sbtab(kcatf, kcatr, Keq, Km, Ka, Ki, S, A_act, A_inh, metabolite_names, reaction_names, state_names) -> sbtab.SBtab.SBtabDocument

   Create a model SBtab.

   The model SBtab contains the values of the state-independent variables,
   i.e. kcatf, kcatr, Km, Ka, and Ki.